The human soul does not have molecules.
The soul is not like the fallen body.
The soul of man was created 'out from nothing' by God.
Created in His image = Bara in the Hebrew.
"So God created [bara] man in his own image, in the image of God he created [bara] him; male and female he created [bara] them." (Genesis 1:27)
God called the created soul 'man' before a body was given!
What God created directly in His image could not be created evil.
The soul is not inherently evil.
It's the fallen body that enslaves its soul into evil.
God is immaterial and invisible.
Likewise... The human soul is immaterial and invisible.
God has volition. The human soul has volition.
It's the fallen body that corrupts the soul's thinking.
"The mind governed by the flesh is death, but the mind governed by the Spirit is capacity for life and peace." Rom 8:6
Remove that body?
Leave the soul on its own?
That same soul would be free of the flesh's desires.
That is why it says we have been crucified with Christ!
We are to no longer walk after the flesh.
The human soul had been imprisoned inside a fallen body it was born into.
A soul is not inherently blind.
But, put the soul in a body with blind eyes?
That soul will live in blindness.
It is the soul that God saved.
Not our bodies!
For you were like sheep going astray, but you have now returned to the Shepherd and Overseer of your souls. 1 Peter 2:25
That is why we will be given a new body when our soul enters into eternal life with God.
In the meanwhile?
God's power of grace will handle our fallen flesh problem if we maintain humility in our soul.
God gives grace to the humble. (James 4:6)
But, not to a boastful braggart.
But he gives us greater grace. That is why Scripture says: “God opposes the proud but gives grace to the humble.”Grace is real power provided by God.
Power to make an unworthy person to function as what is worthy in His sight.
That grace includes saved warriors who enter into battle.
There is a difference in how the warrior fights.
We tend to carry over our old survival thinking when first saved.
Over time, as we learn more and more sound doctrine, we must decrease so that God's power can increase.
"But he said to me, 'My grace is sufficient for you, for my power is made perfect in weakness.' Therefore, I will boast all the more gladly of my weaknesses, so that Christ's power may rest on me."2 Corinthians 12:9
Real men will admit their weakness to God, so that God can transform them into grace power that counts.
In Christ.
Yeah...well...this Dark World is just filled with "real men", isn't it?
Also, Gen 2:7 does not say what you claim! The text doesn't say God created a soul out of nothing. Rather, it says that God "breathed into the nostrils of man the breath of life". Nothing in the text that says God created the soul ex nihilo.
This "breath of life" came directly out of God and was very likely his Holy Spirit who just happens to be the Spirit of Life (Rom 8:2) (What a coincidence, heh?) And this makes sense since A&E DIED spiritually on the day the sinned, and death logically presupposes antecedent life.
Did Jesus create souls ex nihilo when he breathed the Spirit unto his disciples (Jn 20:22)
And there's nothing inherently sinful about man's human body. Man's body (flesh, bones, sinew, blood, etc.) is not inherently evil. If it were then Jesus came into this world intrinsically evil. The term "flesh" in scripture is a convenient metaphor for "human nature" since man was created here below on the physical earth from the physical earth, whereas the Spirit is from above, is invisible and is eternal. The metaphor is a contrasting one. Besides, if the human body is inherently evil, why are God's image-bearers going to receive another body at the Resurrection just like Jesus' for all eternity?
There's not one text in scripture that explicitly teaches that the human body is inherently evil. However, after the Fall, sin did have a disastrous effect on both the material (body) and immaterial (mind, soul, heart) parts of man. No part of humanity escaped escaped the ruinous and corrupting effects of sin.